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GENERAL_ENTITY - Static variable in class gov.ncbi.pmc.dtdanalyzer.Entity
An entity with this "type" is a general entity
GENERAL_ENTITY - Static variable in class gov.ncbi.pmc.dtdanalyzer.SComment
Marks a comment that applies to a general entity definition.
getActiveOpts() - Method in class gov.ncbi.pmc.dtdanalyzer.App
Get the currently active Options
getAllAttributes() - Method in class gov.ncbi.pmc.dtdanalyzer.DTDEventHandler
Returns all declared Attributes
getAllAtttributeNames() - Method in class gov.ncbi.pmc.dtdanalyzer.Attributes
Returns a list of unique attribute names in the collection
getAllElements() - Method in class gov.ncbi.pmc.dtdanalyzer.DTDEventHandler
Returns all declared Elements
getAllEntities() - Method in class gov.ncbi.pmc.dtdanalyzer.DTDEventHandler
Returns all declared Entities
getAllSComments() - Method in class gov.ncbi.pmc.dtdanalyzer.DTDEventHandler
Returns the collection of structured comments
getAttribute(String, String) - Method in class gov.ncbi.pmc.dtdanalyzer.Attributes
Returns the specified Attribute using the element name and the attribute name; null if no matching attribute is in the collection.
getAttributeIterator() - Method in class gov.ncbi.pmc.dtdanalyzer.Attributes
Returns an iterator of all the Attributes in the collection
getAttributes() - Method in class gov.ncbi.pmc.dtdanalyzer.ModelBuilder
Returns all attribute declarations
getAttributesByElementName(String) - Method in class gov.ncbi.pmc.dtdanalyzer.Attributes
Returns all attributes declared for a specific element.
getAttributesByName(String) - Method in class gov.ncbi.pmc.dtdanalyzer.Attributes
Returns all attributes that have the specified name.
getBaseUri() - Method in class gov.ncbi.pmc.dtdanalyzer.DtdModule
Get the base URI.
getBuffer() - Method in class gov.ncbi.pmc.dtdanalyzer.XMLWriter
Because sometimes you just want the buffer.
getChoiceOrSeq() - Method in class gov.ncbi.pmc.dtdanalyzer.ContentModel
Returns the choice-or-sequence child.
getContentModel() - Method in class gov.ncbi.pmc.dtdanalyzer.Element
Returns the ContentModel object associated with this element definition.
getContext(String) - Method in class gov.ncbi.pmc.dtdanalyzer.ModelBuilder
Returns the context of a specified element (in other words, the elements in which the specified element may appear)
getDebug() - Method in class gov.ncbi.pmc.dtdanalyzer.App
If --debug was given, this returns true, otherwise false.
getDefaultValue() - Method in class gov.ncbi.pmc.dtdanalyzer.Attribute
Default value for attribute if declared; null otherwise
getDtdModule() - Method in class gov.ncbi.pmc.dtdanalyzer.DTDEventHandler
Gets the DtdModule associated with this DTD.
getDtdModule() - Method in class gov.ncbi.pmc.dtdanalyzer.ModelBuilder
Returns the DtdModule associated with this DTD.
getDTDOrder() - Method in class gov.ncbi.pmc.dtdanalyzer.Element
Returns the number indicating the order of this element declaration relative to other elements in the DTD
getDtdSpec() - Method in class gov.ncbi.pmc.dtdanalyzer.App
Get the DtdSpecifier.
getDtdSpec(int) - Method in class gov.ncbi.pmc.dtdanalyzer.App
Same, but use this when there are multiple dtds allowed.
getDtdSpecType() - Method in class gov.ncbi.pmc.dtdanalyzer.App
Gets the DTD specification type, either 'd', 's', or 'p'.
getDtdSpecType(int) - Method in class gov.ncbi.pmc.dtdanalyzer.App
Same, but use this one when there are multiple dtds allowed.
getDtdSpecValue() - Method in class gov.ncbi.pmc.dtdanalyzer.App
Gets the DTD specification value, either a filename ('d'), a system identifier, or a public identifier.
getDtdSpecValue(int) - Method in class gov.ncbi.pmc.dtdanalyzer.App
Same, but use this one when there are multiple dtds allowed.
getDtdTitle() - Method in class gov.ncbi.pmc.dtdanalyzer.App
If --title was given, this returns the value, otherwise null.
getDtdTitle(int) - Method in class gov.ncbi.pmc.dtdanalyzer.App
Same, but use this when there are multiple dtds allowed.
getDtdTitle() - Method in class gov.ncbi.pmc.dtdanalyzer.ModelBuilder
Returns the DTD title which will either come from the structured annotation within the top-level DTD module, or else the command line.
getDummyXml() - Method in class gov.ncbi.pmc.dtdanalyzer.App
If -s or -p were used, this should hold the dummy XML file
getDummyXml(int) - Method in class gov.ncbi.pmc.dtdanalyzer.App
Same, but use this one when there are multiple dtds allowed.
getElement(String) - Method in class gov.ncbi.pmc.dtdanalyzer.Elements
Returns an element with the specified name; returns null if nothing available.
getElementIterator() - Method in class gov.ncbi.pmc.dtdanalyzer.Elements
Returns an iterator containing all elements in the collection
getElements() - Method in class gov.ncbi.pmc.dtdanalyzer.ModelBuilder
Returns all element declarations
getEntities() - Method in class gov.ncbi.pmc.dtdanalyzer.ModelBuilder
Returns all entity declarations
getEntity(String, int) - Method in class gov.ncbi.pmc.dtdanalyzer.Entities
 
getGeneralEntities() - Method in class gov.ncbi.pmc.dtdanalyzer.Entities
Returns all the non-parameter Entities declared in the DTD
getHome() - Method in class gov.ncbi.pmc.dtdanalyzer.App
Get the home directory.
getIncluded() - Method in class gov.ncbi.pmc.dtdanalyzer.Entity
Get the value of the included flag.
getKids() - Method in class gov.ncbi.pmc.dtdanalyzer.ContentModel
Returns the Vector of allowed child elements; only meaningful when spec is "mixed".
getKids() - Method in class gov.ncbi.pmc.dtdanalyzer.NameChoiceSeq
Get the kids; this should only be called if type is 1 or 2 (choice or seq)
getKidsIter() - Method in class gov.ncbi.pmc.dtdanalyzer.ContentModel
If spec is "mixed" or "element", this returns an iterator over all of the child element names (not Element objects).
getLine() - Method in class gov.ncbi.pmc.dtdanalyzer.App
Get the parsed command line.
getLineNumber() - Method in class gov.ncbi.pmc.dtdanalyzer.Location
Returns the line number where the declaration occured within the DTD file.
getLocation() - Method in class gov.ncbi.pmc.dtdanalyzer.Attribute
Returns location of the attribute declaration
getLocation() - Method in class gov.ncbi.pmc.dtdanalyzer.Element
Returns the location of the element declaration in the DTD (file name and line number)
getLocation() - Method in class gov.ncbi.pmc.dtdanalyzer.Entity
Returns location of the declaration
getMinifiedModel() - Method in class gov.ncbi.pmc.dtdanalyzer.ContentModel
Returns the minified model string
getMinifiedModel() - Method in class gov.ncbi.pmc.dtdanalyzer.Element
Returns the minified content model string for the element declaration
getMode() - Method in class gov.ncbi.pmc.dtdanalyzer.Attribute
Attribute mode (eg, #IMPLIED or #REQUIRED) or null if none declared
getName() - Method in class gov.ncbi.pmc.dtdanalyzer.Attribute
Attribute name
getName() - Method in class gov.ncbi.pmc.dtdanalyzer.Element
Returns the name of the element
getName() - Method in class gov.ncbi.pmc.dtdanalyzer.Entity
Returns entity name
getName() - Method in class gov.ncbi.pmc.dtdanalyzer.NameChoiceSeq
Returns the name for name types; empty string otherwise.
getName() - Method in class gov.ncbi.pmc.dtdanalyzer.SComment
 
getOutput() - Method in class gov.ncbi.pmc.dtdanalyzer.App
Get the output file/stream.
getParameterEntities() - Method in class gov.ncbi.pmc.dtdanalyzer.Entities
Returns all parameter Entities declared in the DTD
getParent() - Method in class gov.ncbi.pmc.dtdanalyzer.Attribute
Name of the attribute's parent element.
getPublicId() - Method in class gov.ncbi.pmc.dtdanalyzer.DtdModule
Get the public ID
getPublicId() - Method in class gov.ncbi.pmc.dtdanalyzer.Entity
Returns public id or null if none available
getPublicId() - Method in class gov.ncbi.pmc.dtdanalyzer.Location
Returns public identifier for the file containing the declaration.
getQ() - Method in class gov.ncbi.pmc.dtdanalyzer.NameChoiceSeq
Get the quantifier string
getRelSysId() - Method in class gov.ncbi.pmc.dtdanalyzer.DtdModule
Get the relative system ID of the DTD module itself.
getRelSysId() - Method in class gov.ncbi.pmc.dtdanalyzer.Entity
Get the value of the relative system identifier.
getResolver() - Method in class gov.ncbi.pmc.dtdanalyzer.App
If --catalog was given, this will return a valid object, otherwise null.
getRoots() - Method in class gov.ncbi.pmc.dtdanalyzer.App
If --roots was given, this returns the value as an array
getSComment(int, String) - Method in class gov.ncbi.pmc.dtdanalyzer.SComments
Get an SComment by its type and name
getSComments() - Method in class gov.ncbi.pmc.dtdanalyzer.ModelBuilder
Returns all the structured comments.
getSection(String) - Method in class gov.ncbi.pmc.dtdanalyzer.SComment
 
getSectionNameIterator() - Method in class gov.ncbi.pmc.dtdanalyzer.SComment
Returns an iterator of all the names of the sections in this structured comment
getSpec() - Method in class gov.ncbi.pmc.dtdanalyzer.ContentModel
Returns the spec; one of "any", "empty", "text", "mixed", or "element".
getSystemId() - Method in class gov.ncbi.pmc.dtdanalyzer.DtdModule
Get the system ID
getSystemId() - Method in class gov.ncbi.pmc.dtdanalyzer.Entity
Returns system id or null if none available
getSystemId() - Method in class gov.ncbi.pmc.dtdanalyzer.Location
Returns the system name of the file containing the declaration.
getTitle() - Method in class gov.ncbi.pmc.dtdanalyzer.SComment
 
getType() - Method in class gov.ncbi.pmc.dtdanalyzer.Attribute
Type of the attribute, which is essentially the content model (CDATA, enumerated list, etc).
getType() - Method in class gov.ncbi.pmc.dtdanalyzer.Entity
Returns type, which will be either be Entity.PARAMETER_ENTITY (1) or Entity.GENERAL_ENTITY (2)
getType() - Method in class gov.ncbi.pmc.dtdanalyzer.NameChoiceSeq
Get the type
getType() - Method in class gov.ncbi.pmc.dtdanalyzer.SComment
 
getValue() - Method in class gov.ncbi.pmc.dtdanalyzer.Entity
Returns entity value or null if none available
getXML() - Method in class gov.ncbi.pmc.dtdanalyzer.XMLWriter
Returns an XML representation of the DTD content model.
getXslt() - Method in class gov.ncbi.pmc.dtdanalyzer.App
If --xslt was given, this will return a Transformer object.
getXsltParams() - Method in class gov.ncbi.pmc.dtdanalyzer.App
If --params was given, this returns the keys and values in an alternating array.
gov.ncbi.pmc.dtdanalyzer - package gov.ncbi.pmc.dtdanalyzer
 
gov.ncbi.pmc.xml - package gov.ncbi.pmc.xml
 
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