2018 PubMed
PubMed comprises more than 28 million citations for biomedical literature from MEDLINE, life science journals, and online books. Citations may include links to full-text content from PubMed Central and publisher websites. PubMed XML is available from:
PubMed search results
When you search PubMed, you can choose to view the XML on screen or download an XML file.
- Search PubMed at www.pubmed.gov.
- To display the XML, choose XML from the FORMAT menu.
- To create a file, select File from the "Send to" menu. Then choose XML format.
NCBI E-utilities API
The Entrez Programming Utilities (E-utilities) consist of eight server-side programs that provide a stable interface into the Entrez query and database system at the National Center for Biotechnology Information (NCBI).
FTP download
Once a year, NLM releases a complete (baseline) set of PubMed citation records in XML format for download. Incremental update files are then released daily and include new, revised, and deleted citations. The PubMed DTD states any changes to the structure and allowed elements from year to year.
- PubMed 2018 Baseline: ftp://ftp.ncbi.nlm.nih.gov/pubmed/baseline
- PubMed 2018 Update Files: ftp://ftp.ncbi.nlm.nih.gov/pubmed/updatefiles
- Terms and Conditions: ftp://ftp.ncbi.nlm.nih.gov/pubmed/baseline/README.txt
- 2018 PubMed DTD: https://dtd.nlm.nih.gov/ncbi/pubmed/out/pubmed_180101.dtd
Using this documentation
This site provides annotations and examples for all elements and attributes defined in the 2018 PubMed DTD.
For each Element we include:
- Content Model describing the expected contents -- this includes syntax and any parent or child elements
- Valid attributes
- Sample XML
For each Attribute we include:
- Associated elements
- Allowed values, where specified
The menu on the left sidebar expands to show a list of all Elements and Attributes in alphabetical order. On each page the names of Elements and Attributes are hyperlinked for easy navigation within this tool.
If you have any questions, please contact:
- National Center for Biotechnology Information
- info@ncbi.nlm.nih.gov